Hi Michael,
1) No, the max record length is 62.5 Mpts, no matter how many channels you have enabled.
If you require a longer record length I would suggest the MSO5 with 500 Mpts or the MSO6 with 1 Gpts.
(All of these might require paid options to unlock the full record length)
2) The transfer speeds are dependent on many factors, including: connection type (USB or Ethernet), transfer format (ascii or raw ints), waveform type (some waveforms are 8 bits, other 16 bits), etc.
I would need to know the specifics of your setup and measurement to be able to give you a more detailed answer.
In terms of offline analysis, the easiest and most robust option is to use our
TekScope software.
You can also use SCPI to transfer waveforms to your computer and then process them with your own software.